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研究领域(方向):
分子生药学
药用植物基因组学
药用植物分子遗传与资源
个人及工作简历(个人受教育及工作经历):
教育经历
2012/09 -2017/06:西北大学生命科学学院 植物学 理学博士(硕博连读)
2008/09 - 2012/06:甘肃农业大学生命科学技术学院 生物技术 理学学士
工作经历
2021/07 - 至今 西安交通大学医学部药学院 副教授
2021/09 - 2023/07 西安交通大学医学部基础医学院 博士后
2017/07 - 2021/06 西安交通大学医学部药学院 讲师
主要科研项目
1.国家自然科学基金面上项目,32270386,基于多组学技术解析秦艽基原植物特征性代谢成分差异形成的遗传机制,2023/1-2026/12,54万元,在研,主持人。
2.国家自然科学基金青年项目,81903739,基于转录组学和代谢组学的大黄品质差异形成的内在机制研究,2020/1-2021/12, 21万元,结题,主持人。
3.陕西省自然科学基金青年项目,2020JQ-024,基于转录组学的大黄品质差异形成的内在机制研究, 2020/1-2021/12, 3万元,结题,主持人。
4.中国博士后面上基金,2018M643680,基于叶绿体基因组的秦艽类药材原植物DNA分子鉴定研究,2018/01-2020/12,5万元,结题,主持人。
5.西安交通大学新讲师科研支持计划,1191319802,基于RNA-seq探讨中药大黄适应性进化及道地性形成机制,2018/01-2020/12,10万元,结题,主持人。
学术及科研成果、专利、论文
第一作者论文:
1. Tao Zhou, Zhao, Y., Zhou, L. et al. Comparative transcriptome analyses of three Gentiana species provides signals for the molecular footprints of selection effects and the phylogenetic relationships. Mol Genet Genomics 2023, 298: 399–411.
2. Tao Zhou, Guoqing Bai, Yiheng Hu, et al. De novo genome assembly of the medicinal plant Gentiana macrophylla provides insights into the genomic evolution and biosynthesis of iridoids. DNA Research 2022, 29(6): dsac034.
3. Bai, G.#, Chen, C.#, Zhao, C.#, Zhou, T.#, Li, D., Zhou, T., Li, W., Lu, Y., Cong, X., Jia, Y., Li, S., The chromosome-level genome for Toxicodendron vernicifluum provides crucial insights into Anacardiaceae evolution and urushiol biosynthesis, ISCIENCE 2022, 25(7): 104512.
4. Tao Zhou, Jiangyan Sun, Yunyan Zhai, et al. Transcriptome profiles of yellowish-white and fuchsia flower in Rheum palmatum complex for discovery of genes related to the difference of flower color. Plant Molecular Biology 2022, 110:187–197.
5. Tao Zhou, T. Zhang, J. Sun, et al. Tissue-specific transcriptome for Rheum tanguticum reveals candidate genes related to the anthraquinones biosynthesis. Physiol Mol Biol Plants 2021,27: 2487–2501.
6. Tao Zhou, Honghong Zhu, Jian Wang, Yucan Xu, Fusheng Xu, Xumei Wang. Complete Chloroplast Genome Sequences Determination of Rheum Species, and Comparative Chloroplast Genomics and Phylogenetics for the Members belong to Rumiceae. Plant Cell Reports, 2020, 39: 811–824.
7. Tao Zhou, Markus Ruhsam, Jian Wang, Honghong Zhu, Wengli Li, Xiao Zhang, Yucan Xu., Fusheng Xu, Xumei Wang*, The complete chloroplast genome of Euphrasia regelii, pseudogenization of ndh genes and the phylogenetic relationships within Orobanchaceae. Frontiers in Genetics, 2019, 10:444.
8. Tao Zhou., Jian Wang, Yun Jia, Wenli Li, Fusheng Xu, Xumei Wang*, Comparative Chloroplast Genome Analyses of Species in Gentiana section Cruciata (Gentianaceae) and the Development of Authentication Markers. Int. J. Mol. Sci. 2018, 19(7):1962.
9. Tao Zhou, Chen Chen, Yue Wei, Yongxia Chang, Guoqing Bai, Zhonghu Li, Nazish Kanwal, Guifang Zhao*, Comparative transcriptome and chloroplast genome analyses of two related Dipteronia species, Frontiers in Plant Science, 2016, 7: 1512
10. Tao Zhou, Zhonghu Li, Guoqing Bai, Li Feng, Chen Chen, Yue Wei, Yongxia Chang, Guifang Zhao*, Transcriptome sequencing and development of genic SSR markers of an endangered Chinese endemic genus Dipteronia Oliver (Aceraceae), Molecules, 2016, 21(3):166
非第一或通讯作者论文:
1. Zhai, Y., Zhang, T., Guo, Y. Gao C., Zhou, L., Feng, Li., Zhou, T.*, Wang, X.* Phylogenomics, phylogeography and germplasms authentication of the Rheum palmatum complex based on complete chloroplast genomes. J Plant Res, 2023, 136: 291–304.
2. Yang Y, Jia Y, Zhao Y, Wang Y and Zhou T*, Comparative chloroplast genomics provides insights into the genealogical relationships of endangered Tetraena mongolica and the chloroplast genome evolution of related Zygophyllaceae species. Front. Genet., 2022, 13:1026919.
3. Yanci Yang, Tao Zhou, Zengqiang Qian and Guifang Zhao. Phylogenetic relationships in Chinese oaks (Fagaceae, Quercus): Evidence from plastid genome using low-coverage whole genome sequencing. Genomics, 2021, 113(3): 1438-1447.
4. Chen, X.-D.; Zhang, X.; Zhang, H.; Zhou, T.; Zhao, Y.-M.; Yang, J.; Zhao, G.-F. Genetic Differentiation and Demographic History of Three Cerris Oak Species in China Based on Nuclear Microsatellite Makers. Forests 2021, 12, 1164.
5. Xiaodan Chen, Jia Yang, Yufan Guo, Yuemei Zhao, Tao Zhou, Xiao Zhang, ... & Guifang Zhao (2021). Spatial genetic structure and demographic history of the dominant forest oak Quercus fabri hance in subtropical China. Frontiers in plant science, 2278.
6. Chen Chen, Xinwei Shi, Tao Zhou, Weimin Li, Sifeng Li, and Guoqing Bai. Full-length transcriptome analysis and identification of genes involved in asarinin and aristolochic acid biosynthesis in medicinal plant Asarum sieboldii. Genome. 2020 64(6): 639-653.
7. Yuemei Zhao, Tao Zhou, Xiaodan Chen & Xiao Zhang, Characterization of the complete chloroplast genome of Viburnum schensianum (Adoxaceae), Mitochondrial DNAPart B, 2020, 5:2, 1196-1197.
8. Xiao-Dan Chen, Jia Yang, Li Feng, Tao Zhou, Hao Zhang, Hui-Min Li, Guo-Qing Bai, Xu Meng, Zhong-Hu Li, Gui-Fang Zhao*, Phylogeography and population dynamics of an endemic oak (Quercus fabri Hance) in subtropical China revealed by molecular data and ecological niche modeling, 2020, Tree Genetics & Genomes 16, 2.
9. Yuemei Zhao, Tao Zhou, Xiaodan Chen, Xiao Zhang, Guoqing Bai, GuifangZhao, Characterization of the complete chloroplast genome of Abies chensiensis (Pinaceae), an endemic to China, Mitochondrial DNA Part B, 2019, 4:1, 23-24.
10. Xumei Wang#, *, Tao Zhou#, Guoqing Bai, Yuemei Zhao, Complete chloroplast genome sequence of Fagopyrum dibotrys: genome features, comparative analysis and phylogenetic relationships. Scientific reports, 2018, 8: 12379
11. Jing-Jing Sun; Tao Zhou; Rui-Ting Zhang; Yun Jia; Yue-Mei Zhao; Jia Yang; Gui-Fang Zhao*, Comparative transcriptomes and development of expressed sequence tag-simple sequence repeat markers for two closely related oak species, Journal of Systematics and Evolution, 2019, 57:440-450.
12. Xumei Wang#, *, Li Feng#, Tao Zhou#, Markus Ruhsam*, Lei Huang, Xiaoqi Hou, Xiaojie Sun, Kai Fan, Min Huang, Yun Zhou, Jie Song, Genetic and chemical differentiation characterizes top-geoherb and non-top-geoherb areas in the TCM herb rhubarb, Scientific reports, 2018, 8(1): 9424
13. Xiao Zhang; Tao Zhou; Jia Yang; Jingjing Sun; Miaomiao Ju; Yuemei Zhao; Guifang Zhao, Comparative Analyses of Chloroplast Genomes of Cucurbitaceae Species: Lights into Selective Pressures and Phylogenetic Relationships, Molecules, 2018, 23(9): 2165
14. Yuemei Zhao, Tao Zhou, Xiao Zhang, Xiaodan Chen & Guoqing Bai, Characterization of the complete chloroplast genome of Fraxinus mandshurica (Oleaceae), Mitochondrial DNA Part B, 2018, 3:2, 1270-1271.
15. Xinxin Zhang, MingJin, Nigatu Tadesse, Jun Dang, Tao Zhou, Hui Zhang, Sicen Wang, Zengjun Guo, Yoichiro Ito, Dioscorea zingiberensis C. H. Wright: An overview on its traditional use, phytochemistry, harmacology, clinical applications, quality control, and toxicity, Journal of Ethnopharmacology, 2018, 220: 283-293.
16. Ting Reng, Yanci Yang, Tao Zhou, Zhanlin Liu*, Comparative Plastid Genomes of Primula Species: Sequence Divergence and Phylogenetic Relationships, Int. J. Mol. Sci. 2018, 19(4):1050.
17. Yanci Yang, Juan Zhu, Li Feng, Tao Zhou, Guoqing Bai, Jiao Yang and Guifang Zhao*, Plastid Genome Comparative and Phylogenetic Analyses of the Key Genera in Fagaceae: Highlighting the Effect of Codon Composition Bias in Phylogenetic Inference. Front. Plant Sci. 2018, 9:82.
18. Guoqing Bai, Tao Zhou, Xiao Zhang, Xiaodan Chen, Jia Yang, Zhonghu Li, Guifang Zhao*, Genetic differentiation and population genetic structure of the Chinese endemic Dipteronia Oliv. revealed by cpDNA and AFLP data, Forests, 2017, 8(11): 424
19. Xiao Zhang, Tao Zhou, Nazish Kanwal, Yuemei Zhao, Guoqing Bai, Guifang Zhao*, Completion of eight Gynostemma BL. (Cucurbitaceae) chloroplastgenomes: characterization, comparative analysis, and phylogenetic relationships, Frontiers in Plant Science, 2017.9.12, 8: 1583
20. Shuyun Zeng, Tao Zhou, Kai Han, Yanci Yang, Jianhua Zhao, Zhan-Lin Liu*, The complete chloroplast genome sequences of six Rehmannia species Genes, 2017, 8(3): 103
21. Yanci Yang, Tao Zhou, Dong Duan, Jia Yang, Li Feng, Guifang Zhao*, Comparative analysis of the complete chloroplast genomes of five Quercus species, Frontiers in Plant Science, 2016, 7: 959
Yuemei Zhao, Tao Zhou, Zhonghu Li; Guifang Zhao*, Characterization of global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers in two species of Gynostemma (Cucurbitaceae), Molecules, 2015, 20(12): 21214-21231
联系方式
电子邮箱:zhoutao1@mail.xjtu.edu.cn&woody196@163.com
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联系地址:
陕西省咸阳市秦都区钓台街道交大创新港校区21号楼
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